STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IFT140Uncharacterized protein. (706 aa)    
Predicted Functional Partners:
IFT122
Intraflagellar transport 122.
  
 0.969
WDR35
WD repeat-containing protein 35; As a component of the IFT complex A (IFT-A), a complex required for retrograde ciliary transport and entry into cilia of G protein-coupled receptors (GPCRs), it is involved in ciliogenesis and ciliary protein trafficking.
  
 
 0.959
WDR19
WD repeat domain 19.
    
 0.954
G3UL58_LOXAF
WD_REPEATS_REGION domain-containing protein.
 
     0.925
TTC21B
Tetratricopeptide repeat domain 21B.
  
 0.915
IFT43
Uncharacterized protein.
    
 0.915
TTC21A
Uncharacterized protein.
   
 0.781
IFT88
Intraflagellar transport 88.
     
 0.779
IFT80
Intraflagellar transport 80.
   
 0.771
IFT52
Intraflagellar transport 52.
  
  
 0.751
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.