STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IFT140Uncharacterized protein. (706 aa)    
Predicted Functional Partners:
IFT122
Intraflagellar transport 122.
  
 0.996
WDR19
WD repeat domain 19.
   
 0.987
WDR35
WD repeat-containing protein 35; As a component of the IFT complex A (IFT-A), a complex required for retrograde ciliary transport and entry into cilia of G protein-coupled receptors (GPCRs), it is involved in ciliogenesis and ciliary protein trafficking.
  
 0.986
TTC21B
Tetratricopeptide repeat domain 21B.
  
 0.983
IFT43
Uncharacterized protein.
    
 0.976
G3UL58_LOXAF
WD_REPEATS_REGION domain-containing protein.
 
  
  0.964
TULP3
Tubby-like protein; Belongs to the TUB family.
    
 0.939
IFT172
Intraflagellar transport 172.
   
 0.930
IFT52
Intraflagellar transport 52.
  
 0.923
IFT20
Intraflagellar transport 20.
   
 0.913
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.