STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C8AComplement C8 alpha chain. (541 aa)    
Predicted Functional Partners:
C8G
Complement C8 gamma chain; Belongs to the calycin superfamily. Lipocalin family.
   
 0.988
C9
Complement C9.
   
0.981
C8B
Complement C8 beta chain.
  
0.975
C5
Complement C5.
   
 0.961
C6
Complement C6.
   
 
0.950
C7
Uncharacterized protein.
   
 
0.944
EDNRB
Endothelin receptor type B; Belongs to the G-protein coupled receptor 1 family.
   
 
 0.837
C1R
Complement C1r; Belongs to the peptidase S1 family.
   
 
 0.743
XPNPEP3
X-prolyl aminopeptidase 3.
      
 0.733
MASP2
Mannan binding lectin serine peptidase 2; Belongs to the peptidase S1 family.
   
 
 0.718
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.