STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TPGS2Tubulin polyglutamylase complex subunit 2. (293 aa)    
Predicted Functional Partners:
LRRC49
Leucine rich repeat containing 49.
    
 0.971
NICN1
Uncharacterized protein.
    
 0.971
TTLL1
Tubulin tyrosine ligase like 1.
   
 0.964
TPGS1
Tubulin polyglutamylase complex subunit 1.
    
 0.890
C11orf49
Chromosome 11 open reading frame 49.
    
   0.760
TTL
Tubulin tyrosine ligase.
   
  0.625
TRMT13
tRNA methyltransferase 13 homolog.
      
 0.579
TBCB
Tubulin folding cofactor B.
      
 0.549
C5orf22
Chromosome 5 open reading frame 22.
      
 0.548
KIAA1328
Uncharacterized protein.
      
 0.547
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.