STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPGS2Tubulin polyglutamylase complex subunit 2. (293 aa)    
Predicted Functional Partners:
NICN1
Uncharacterized protein.
    
 0.749
LRRC49
Leucine rich repeat containing 49.
    
 0.746
TTLL1
Tubulin tyrosine ligase like 1.
   
 0.729
TPGS1
Tubulin polyglutamylase complex subunit 1.
    
 0.634
C11orf49
Chromosome 11 open reading frame 49.
    
   0.584
TTL
Tubulin tyrosine ligase.
   
 0.578
KIAA1328
Uncharacterized protein.
      
 0.573
TRMT13
tRNA methyltransferase 13 homolog.
      
 0.521
SAYSD1
SAYSVFN motif domain containing 1.
      
 0.521
C5orf22
Chromosome 5 open reading frame 22.
      
 0.521
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.