STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHAMP1Chromosome alignment maintaining phosphoprotein 1. (811 aa)    
Predicted Functional Partners:
MAD2L2
Mitotic arrest deficient 2 like 2.
    
 
 0.638
POGZ
Pogo transposable element derived with ZNF domain.
   
 0.576
CBX1
Chromobox 1.
    
 
 0.505
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
  0.446
PSD4
Uncharacterized protein.
      
 0.426
CBX5
Chromobox 5.
    
 
 0.423
CBX3
Uncharacterized protein.
    
 
 0.410
G3TSC5_LOXAF
Uncharacterized protein.
    
 
 0.410
RAD50
Zinc-hook domain-containing protein.
    
 
 0.409
UTP15
UTP15 small subunit processome component.
   
 0.404
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.