Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHAMP1Chromosome alignment maintaining phosphoprotein 1. (811 aa)    
Predicted Functional Partners:
MAD2L2
Mitotic arrest deficient 2 like 2.
    
 
 0.941
POGZ
Pogo transposable element derived with ZNF domain.
   
 0.856
CBX1
Chromobox 1.
    
 
 0.809
CBX5
Chromobox 5.
    
 
 0.807
RAD50
Zinc-hook domain-containing protein.
    
   0.785
CBX3
Uncharacterized protein.
    
 
 0.780
G3TSC5_LOXAF
Uncharacterized protein.
    
 
 0.780
TTC4
Tetratricopeptide repeat domain 4.
    
 
 0.647
TXLNG
Taxilin gamma.
    
   0.589
PSD4
Uncharacterized protein.
      
 0.573
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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