STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KIAA1328Uncharacterized protein. (182 aa)    
Predicted Functional Partners:
G3T7Q2_LOXAF
Uncharacterized protein.
   
    0.953
RPAP2
RNA polymerase II associated protein 2.
   
    0.953
FRK
Tyrosine-protein kinase.
   
    0.803
G3TD28_LOXAF
Uncharacterized protein.
    
   0.759
CCDC14
Uncharacterized protein.
    
   0.759
BLOC1S6
Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. May play a role in intracellular vesicle trafficking, particular [...]
   
  
 0.559
TPGS2
Tubulin polyglutamylase complex subunit 2.
      
 0.547
G3UNS7_LOXAF
Uncharacterized protein.
   
    0.509
MRPS16
Mitochondrial ribosomal protein S16.
      
 0.508
G3TXC1_LOXAF
Uncharacterized protein.
      
 0.504
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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