STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUT1RRM domain-containing protein. (869 aa)    
Predicted Functional Partners:
WDR24
WD repeat domain 24.
   
    0.689
DIS3L2
Rrp44_CSD1 domain-containing protein.
    
 
 0.597
PAPOLG
Poly(A) polymerase gamma.
   
  
 0.583
PRPF4
Pre-mRNA processing factor 4.
   
   0.573
LIN28A
Lin-28 homolog A.
   
 0.572
SART3
Spliceosome associated factor 3, U4/U6 recycling protein.
   
 
 0.566
CPSF3
Cleavage and polyadenylation specific factor 3.
    
 0.551
CPSF1
Cleavage and polyadenylation specific factor 1.
    
 0.543
RSPRY1
Ring finger and SPRY domain containing 1.
     
 0.536
LEPROTL1
Leptin receptor overlapping transcript like 1.
      
 0.536
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.