STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPOCD1TFIIS central domain-containing protein. (625 aa)    
Predicted Functional Partners:
ZKSCAN2
Zinc finger with KRAB and SCAN domains 2.
      
 0.736
DNMT3L
PHD-type domain-containing protein.
    
 0.680
NIPBL
Nipped-B protein.
   
  
 0.679
TASOR
Transcription activation suppressor.
   
  
 0.609
PIN1
Peptidyl-prolyl cis-trans isomerase.
    
 
 0.591
DNAJC9
DnaJ heat shock protein family (Hsp40) member C9.
      
 0.590
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
  
 0.580
DNMT3A
DNA methyltransferase 3 alpha; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
     
 0.578
TSPYL5
TSPY like 5; Belongs to the nucleosome assembly protein (NAP) family.
      
 0.578
SH2D5
SH2 domain containing 5.
      
 0.570
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.