Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MEMO1Mediator of cell motility 1. (297 aa)    
Predicted Functional Partners:
RPL32
Ribosomal protein L32.
 
      0.883
G3U7Y4_LOXAF
Uncharacterized protein.
 
      0.880
UBE3D
Ubiquitin protein ligase E3D.
    
   0.778
BPNT1
3'(2'), 5'-bisphosphate nucleotidase 1.
  
   0.600
CAMSAP2
Calmodulin regulated spectrin associated protein family member 2.
      
 0.572
ZNRF1
Zinc and ring finger 1.
      
 0.555
ERBB2
Receptor protein-tyrosine kinase.
    
 0.537
TACC1
Transforming acidic coiled-coil containing protein 1.
   
  0.522
TUSC3
Tumor suppressor candidate 3.
 
 
  
 0.513
HBEGF
Heparin binding EGF like growth factor.
     
  0.506
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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