Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C6Complement C6. (786 aa)    
Predicted Functional Partners:
C5
Complement C5.
   
 0.999
C7
Uncharacterized protein.
   
0.997
C8B
Complement C8 beta chain.
   
 
0.993
C9
Complement C9.
   
0.993
C8G
Complement C8 gamma chain; Belongs to the calycin superfamily. Lipocalin family.
   
 0.971
C8A
Complement C8 alpha chain.
   
 
0.950
ITIH1
Inter-alpha-trypsin inhibitor heavy chain 1.
   
  
 0.820
G3T7Z9_LOXAF
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 
 0.637
G3T2J6_LOXAF
Uncharacterized protein.
   
 0.547
C3
Complement C3.
   
 0.547
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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