STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RELNReelin. (3396 aa)    
Predicted Functional Partners:
VLDLR
Very low density lipoprotein receptor.
    
 0.996
LRP8
LDL receptor related protein 8.
    
 0.965
ITGA3
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
    
 0.919
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.914
DAB1
DAB adaptor protein 1.
    
 0.818
LDLR
Low density lipoprotein receptor.
    
 0.796
ITGB8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.696
ITGA5
Integrin subunit alpha 5; Belongs to the integrin alpha chain family.
    
 0.690
ITGA9
Integrin_alpha2 domain-containing protein.
    
 0.683
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
    
 0.680
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.