Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NEMFNuclear export mediator factor. (1058 aa)    
Predicted Functional Partners:
LTN1
Listerin E3 ubiquitin protein ligase 1.
   
 0.991
TCF25
Transcription factor 25.
   
 0.990
ANKZF1
Ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1.
   
 0.882
RPL8
Ribosomal protein L8.
    
  0.855
RPL18A
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
    
  0.851
THOC2
THO complex 2.
   
    0.821
RPL29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
    
 0.800
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
   
 0.800
RPL23
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
  0.795
RPL13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
    
  0.793
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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