Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALKBH3AlkB homolog 3, alpha-ketoglutaratedependent dioxygenase. (286 aa)    
Predicted Functional Partners:
ASCC2
Activating signal cointegrator 1 complex subunit 2.
    
 0.950
ASCC1
Activating signal cointegrator 1 complex subunit 1.
    
 0.945
TRIP4
Thyroid hormone receptor interactor 4.
    
 
 0.930
ASCC3
Activating signal cointegrator 1 complex subunit 3.
    
 0.857
G3TWP0_LOXAF
SEC63 domain-containing protein.
    
 0.857
ALKBH1
AlkB homolog 1, histone H2A dioxygenase.
      
 0.825
EEF1AKNMT
EEF1A lysine and N-terminal methyltransferase.
     
 0.704
KDM6A
Lysine demethylase 6A.
   
 0.690
MTCH2
Mitochondrial carrier 2.
   
  
 0.668
ARID4A
AT-rich interaction domain 4A.
   
 0.599
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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