STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX14SRY-box transcription factor 14. (240 aa)    
Predicted Functional Partners:
POU5F1
POU domain protein.
    
 0.543
TCF7
Transcription factor 7.
    
 0.543
G3UHL2_LOXAF
POU-specific domain-containing protein.
    
 0.543
SIX6
SIX homeobox 6.
   
 
 0.504
ZIC3
Zic family member 3.
    
 0.502
NANOG
Homeobox domain-containing protein.
    
 0.501
RFX3
Regulatory factor X3.
    
 
 0.475
FOXJ1
Forkhead box J1.
   
 0.469
UBE2I
Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.468
JUP
Junction plakoglobin.
    
 0.464
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.