STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SOX14SRY-box transcription factor 14. (240 aa)    
Predicted Functional Partners:
NAIF1
Nuclear apoptosis inducing factor 1.
    
   0.665
CTNNB1
Catenin beta 1.
    
 0.625
POU5F1
POU domain protein.
    
 0.612
G3UHL2_LOXAF
POU-specific domain-containing protein.
    
 0.612
NKX2-2
NK2 homeobox 2.
   
 
 0.602
TAL2
TAL bHLH transcription factor 2.
    
 
 0.587
NANOG
Homeobox domain-containing protein.
    
 0.584
NPSR1
Neuropeptide S receptor 1; Belongs to the G-protein coupled receptor 1 family. Vasopressin/oxytocin receptor subfamily.
    
 0.559
CHRNA6
Cholinergic receptor nicotinic alpha 6 subunit.
    
 
 0.530
TCF7
Transcription factor 7.
    
 0.529
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.