STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT5Synaptotagmin 5. (386 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
     
 0.584
G3U095_LOXAF
Uncharacterized protein.
     
0.584
NPTN
Neuroplastin.
   
 
 0.549
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.535
VAMP1
Vesicle associated membrane protein 1.
   
 0.526
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
0.503
G3UF18_LOXAF
C2 domain-containing protein.
     
 0.491
STX1B
Syntaxin 1B; Belongs to the syntaxin family.
   
 0.468
STX1A
Syntaxin 1A.
   
 0.468
SLC32A1
Solute carrier family 32 member 1.
   
 
 0.433
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.