Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BEND5BEN domain containing 5. (420 aa)    
Predicted Functional Partners:
C1QL2
Complement C1q like 2.
    
 0.575
AGBL4
Peptidase_M14 domain-containing protein.
 
  
 0.547
BEND6
BEN domain containing 6.
      
 0.532
FAF1
Fas associated factor 1.
      
 0.500
BEND4
BEN domain containing 4.
      
 0.490
BEND3
BEN domain containing 3.
    
 
 0.466
PTX3
Pentraxin 3.
      
 0.465
AK9
Uncharacterized protein.
    
  0.425
G3TCK5_LOXAF
Uncharacterized protein.
    
  0.425
GPR75
G protein-coupled receptor 75.
      
 0.417
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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