STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3SSJ8_LOXAFUncharacterized protein. (552 aa)    
Predicted Functional Partners:
GNL1
G protein nucleolar 1 (putative).
    
   0.810
PAPSS1
3'-phosphoadenosine 5'-phosphosulfate synthase 1.
    
   0.677
PAPSS2
3'-phosphoadenosine 5'-phosphosulfate synthase 2.
    
   0.677
YDJC
YdjC chitooligosaccharide deacetylase homolog.
   
  
 0.596
LRRC52
Leucine rich repeat containing 52.
      
 0.535
PRRG3
Proline rich and Gla domain 3.
      
 0.501
EFCAB5
EF-hand calcium binding domain 5.
      
 0.492
LSG1
Large 60S subunit nuclear export GTPase 1.
    
   0.477
TCF23
Transcription factor 23.
   
  
 0.471
TM4SF4
Transmembrane 4 L six family member 4.
      
 0.457
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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