STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCTD9Potassium channel tetramerization domain containing 9. (342 aa)    
Predicted Functional Partners:
RNF24
Ring finger protein 24.
      
 0.814
CLRN3
Clarin 3.
      
 0.811
UBOX5
U-box domain containing 5.
      
 0.786
TOP2B
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
   
 
 0.763
TOP2A
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
   
 
 0.763
DOCK5
Dedicator of cytokinesis 5; Belongs to the DOCK family.
      
 0.663
KCTD19
Potassium channel tetramerization domain containing 19.
     
 0.653
ANKRD9
Ankyrin repeat domain 9.
      
 0.644
KCTD11
Potassium channel tetramerization domain containing 11.
      
 0.576
SLC30A9
Solute carrier family 30 member 9.
      
 0.572
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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