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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YTHDC2YTH domain containing 2. (1274 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
   
  0.970
G3U095_LOXAF
Uncharacterized protein.
   
  0.970
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 
 0.880
CSTF1
Cleavage stimulation factor subunit 1.
   
 
 0.872
CSTF3
Cleavage stimulation factor subunit 3.
   
 
 0.863
MEIOC
Meiosis specific with coiled-coil domain.
    
 
 0.862
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 
 0.857
METTL14
Methyltransferase like 14; Belongs to the MT-A70-like family.
   
 
 0.811
WTAP
WT1 associated protein.
    
 
 0.804
G3U8J3_LOXAF
Uncharacterized protein.
   
 0.798
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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