Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLEC9AC-type lectin domain containing 9A. (241 aa)    
Predicted Functional Partners:
CLEC4D
C-type lectin domain family 4 member D.
   
 
 0.669
THBD
Thrombomodulin.
    
 0.648
CD180
CD180 molecule.
   
 0.598
LY75
Uncharacterized protein.
      
 0.537
SYK
Tyrosine-protein kinase.
    
 0.507
FLT3
Fms related tyrosine kinase 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
    
 0.507
MPPE1
Metallophosphoesterase 1.
      
 0.504
BATF3
Basic leucine zipper ATF-like transcription factor 3.
    
 
 0.499
ITGAE
Integrin subunit alpha E; Belongs to the integrin alpha chain family.
    
 0.468
CD8A
CD8a molecule.
   
  
 0.462
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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