Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLEC1AC-type lectin domain family 1 member A. (270 aa)    
Predicted Functional Partners:
SYK
Tyrosine-protein kinase.
    
 0.856
FIBCD1
Fibrinogen C domain containing 1.
   
 0.820
G3T5I4_LOXAF
Uncharacterized protein.
    
 0.792
G3TUB2_LOXAF
Uncharacterized protein.
    
 0.688
ZAP70
Tyrosine-protein kinase.
    
 0.608
TYROBP
TYRO protein tyrosine kinase binding protein.
   
 0.606
NLRP11
Uncharacterized protein.
    
 0.568
PRDM2
PR/SET domain 2.
    
 0.556
G3T7A6_LOXAF
Peptidoglycan-recognition protein; Pattern receptor that binds to murein peptidoglycans (PGN) of Gram-positive bacteria. May kill Gram-positive bacteria by interfering with peptidoglycan biosynthesis. Involved in innate immunity.
   
  
 0.507
G3TNK1_LOXAF
Peptidoglycan-recognition protein; Pattern receptor that binds to murein peptidoglycans (PGN) of Gram-positive bacteria. May kill Gram-positive bacteria by interfering with peptidoglycan biosynthesis. Involved in innate immunity.
   
  
 0.507
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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