Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MICAL2Microtubule associated monooxygenase, calponin and LIM domain containing 2. (1105 aa)    
Predicted Functional Partners:
G3TUY3_LOXAF
BMERB domain-containing protein.
 
      0.900
RAB10
RAB10, member RAS oncogene family.
   
 0.732
G3SZ48_LOXAF
Uncharacterized protein.
   
 0.553
RAB8B
RAB8B, member RAS oncogene family.
   
 0.531
RAB8A
RAB8A, member RAS oncogene family.
   
 0.531
RAB1A
RAB1A, member RAS oncogene family.
    
 
 0.513
RAB1B
RAB1B, member RAS oncogene family.
    
 
 0.513
G3U2A8_LOXAF
Uncharacterized protein.
   
 0.456
LOC100668473
Uncharacterized protein.
   
 0.456
KIF23
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.448
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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