STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF8Zinc finger protein 8. (570 aa)    
Predicted Functional Partners:
TRIM28
Tripartite motif containing 28.
   
  0.849
TRIM33
Tripartite motif containing 33.
   
  0.678
MSH3
Uncharacterized protein.
    
 
 0.574
MSH3-2
DNA_MISMATCH_REPAIR_2 domain-containing protein.
    
 
 0.574
CBX5
Chromobox 5.
    
  0.555
ZNF189
Zinc finger protein 189.
   
    0.550
REC114
REC114 meiotic recombination protein.
    
 
 0.539
TRIM24
Tripartite motif containing 24.
   
  0.516
CBX3
Uncharacterized protein.
    
  0.489
G3TSC5_LOXAF
Uncharacterized protein.
    
  0.489
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.