STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D14TBC1 domain family member 14. (691 aa)    
Predicted Functional Partners:
TRAPPC8
Trafficking protein particle complex 8.
    
 
 0.772
TRAPPC11
Trafficking protein particle complex 11.
    
 
 0.721
TRAPPC12
Trafficking protein particle complex 12.
    
 
 0.712
TRAPPC2L
Trafficking protein particle complex 2 like.
    
 
 0.694
TRAPPC5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 
 0.685
TRAPPC6B
Trafficking protein particle complex 6B.
    
   0.665
ULK1
Unc-51 like autophagy activating kinase 1.
    
 0.642
TRAPPC13
Trafficking protein particle complex 13.
    
 
 0.620
G3UFA4_LOXAF
Uncharacterized protein.
    
 
 0.620
CLEC16A
C-type lectin domain containing 16A.
      
 0.536
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.