Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A6Solute carrier family 38 member 6. (430 aa)    
Predicted Functional Partners:
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
   
    0.757
SLC35C2
Solute carrier family 35 member C2.
   
 
 0.689
NOCT
Nocturnin.
   
  
 0.680
SLC38A9
Solute carrier family 38 member 9.
      
 0.595
SLC41A2
Solute carrier family 41 member 2.
      
 0.554
SLC19A2
Solute carrier family 19 member 2.
    
 
 0.551
SLC52A3
Solute carrier family 52 member 3.
      
 0.546
FNDC4
Fibronectin type III domain containing 4.
      
 0.511
SLC31A2
Solute carrier family 31 member 2.
   
  
 0.499
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.493
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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