STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A6Solute carrier family 38 member 6. (430 aa)    
Predicted Functional Partners:
SLC35C2
Solute carrier family 35 member C2.
   
  
 0.588
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
   
    0.571
NOCT
Nocturnin.
   
  
 0.570
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.533
LAMTOR1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.499
LAMTOR5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
    
 0.492
RRAGA
Ras related GTP binding A.
   
 0.468
RRAGB
Ras related GTP binding B.
   
 0.468
IL4
Uncharacterized protein.
   
 0.453
SLC38A9
Solute carrier family 38 member 9.
      
 0.452
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.