STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM174BFamily with sequence similarity 174 member B. (132 aa)    
Predicted Functional Partners:
LYSMD4
LysM domain containing 4.
      
 0.802
CRYGN
Crystallin gamma N; Belongs to the beta/gamma-crystallin family.
      
 0.555
TSPO2
Translocator protein 2.
      
 0.555
NUP50
Nucleoporin 50.
      
 0.529
SCAMP4
Secretory carrier-associated membrane protein.
      
 0.515
ST8SIA2
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.
      
 0.500
XXYLT1
Uncharacterized protein.
      
 0.495
TBC1D16
Rab-GAP TBC domain-containing protein.
      
 0.492
GPA33
Glycoprotein A33.
      
 0.471
EPM2AIP1
EPM2A interacting protein 1.
      
 0.461
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.