STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF170Ring finger protein 170. (261 aa)    
Predicted Functional Partners:
ERLIN2
ER lipid raft associated 2.
    
 
 0.671
ERLIN1
ER lipid raft associated 1.
    
 
 0.601
TMUB1
Transmembrane and ubiquitin like domain containing 1.
    
 
 0.594
UBE2J1
Ubiquitin conjugating enzyme E2 J1.
    
 
 0.577
C6orf120
Chromosome 6 open reading frame 120.
      
 0.545
RNF41
Ring finger protein 41.
   
  
 0.446
PPP1R26
PPP1R26_N domain-containing protein.
      
 0.441
SLC25A27
Solute carrier family 25 member 27; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.439
TMEM134
Uncharacterized protein.
      
 0.438
TOR2A
Torsin.
      
 0.428
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.