STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POMPProteasome maturation protein. (140 aa)    
Predicted Functional Partners:
PSMB1
Proteasome subunit beta.
   
 0.996
PSMB4
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.995
PSMA3
Proteasome subunit alpha type.
   
 0.994
PSMB2
Proteasome subunit beta.
   
 0.994
PSMA4
Proteasome subunit alpha type.
   
 0.992
PSMA6
Proteasome subunit alpha type.
   
 0.992
PSMB9
Proteasome subunit beta.
   
 0.992
PSMA1
Proteasome subunit alpha type.
   
 0.991
PSMB6
Proteasome subunit beta.
   
 0.987
PSMA2
Proteasome subunit alpha type.
   
 0.985
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.