STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH24Cadherin 24; Cadherins are calcium-dependent cell adhesion proteins. (781 aa)    
Predicted Functional Partners:
FOXN1
Forkhead box N1.
     
 0.639
LGALSL
Galectin.
     
 0.585
CTNND1
Catenin delta 1.
    
 0.547
ANKDD1B
Ankyrin repeat and death domain containing 1B.
    
 0.540
JUP
Junction plakoglobin.
    
 0.504
CTNNB1
Catenin beta 1.
    
 0.494
ARVCF
ARVCF delta catenin family member.
    
 0.480
DLL4
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
    
 0.472
CDH12
Cadherin 12; Cadherins are calcium-dependent cell adhesion proteins.
  
 
 
0.466
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.