STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPTY2D1SPT2 chromatin protein domain containing 1. (678 aa)    
Predicted Functional Partners:
UEVLD
UEV and lactate/malate dehyrogenase domains.
 
 
 0.756
ELOB
Elongin B.
   
 0.673
TARBP2
TARBP2 subunit of RISC loading complex.
      
 0.580
GOSR1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 0.523
FIGLA
Folliculogenesis specific bHLH transcription factor.
      
 0.518
CUL2
Cullin 2; Belongs to the cullin family.
    
 0.513
USO1
USO1 vesicle transport factor.
   
 0.507
STX5
Syntaxin 5; Belongs to the syntaxin family.
    
 0.507
IFT20
Intraflagellar transport 20.
   
 0.463
MRPL40
Mitochondrial ribosomal protein L40.
      
 0.457
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.