STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTGDSLipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (191 aa)    
Predicted Functional Partners:
HPGDS
Hematopoietic prostaglandin D synthase; Belongs to the GST superfamily.
   
 
 0.956
PTGES
Prostaglandin E synthase.
   
 
 0.924
PTGES2
Prostaglandin E synthase 2; Belongs to the GST superfamily.
     
 0.920
PTGIS
Prostaglandin I2 synthase; Belongs to the cytochrome P450 family.
    
 0.920
TBXAS1
Thromboxane A synthase 1; Belongs to the cytochrome P450 family.
   
 
 0.919
PTGS1
Prostaglandin-endoperoxide synthase 1.
     
 0.917
PTGES3
CS domain-containing protein.
     
 0.917
PTGS2
Prostaglandin-endoperoxide synthase 2.
     
 0.913
PRXL2B
Peroxiredoxin like 2B.
     
 0.902
G3T450_LOXAF
Aldo_ket_red domain-containing protein.
    
 0.901
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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