STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZYG11BZyg-11 family member B, cell cycle regulator. (744 aa)    
Predicted Functional Partners:
CUL2
Cullin 2; Belongs to the cullin family.
    
 0.786
RBX1
Ring-box 1.
     
 0.623
ELOB
Elongin B.
    
 0.620
VHL
Uncharacterized protein.
   
 
 0.590
ELOC
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
   
 
 0.582
ZER1
Zyg-11 related cell cycle regulator.
     
0.530
KLHDC2
Kelch domain containing 2.
   
 
 0.448
LRR1
Leucine rich repeat protein 1.
   
  
 0.447
KLHDC10
Kelch domain containing 10.
   
 
 0.423
KLHDC3
Kelch domain containing 3.
   
 
 0.419
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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