STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGAM5PGAM family member 5, mitochondrial serine/threonine protein phosphatase. (291 aa)    
Predicted Functional Partners:
FUNDC1
FUN14 domain containing 1.
     
 0.983
BCL2L1
BCL2 like 1.
    
 0.965
DNM1L
Dynamin 1 like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.955
KEAP1
Kelch like ECH associated protein 1.
    
 
 0.863
PINK1
PTEN induced kinase 1.
    
 
 0.768
FUNDC2
Uncharacterized protein.
     
 0.767
BPGM
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
      
 0.656
G3UFQ3_LOXAF
Uncharacterized protein.
     
 0.642
PHB2
Prohibitin.
    
 
 0.629
G3T5G6_LOXAF
Rhomboid domain-containing protein.
   
  
 0.600
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.