STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSI2Uncharacterized protein. (182 aa)    
Predicted Functional Partners:
DAZAP1
DAZ associated protein 1.
     
 0.817
MSI1
Musashi RNA binding protein 1.
     
  0.762
ZC3H14
Zinc finger CCCH-type containing 14.
    
 
 0.664
CSTF3
Cleavage stimulation factor subunit 3.
   
 
 0.662
MAPT
Microtubule-associated protein.
    
 
 0.530
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.520
ZC3H6
Zinc finger CCCH-type containing 6.
    
 
 0.495
DKK4
Dickkopf WNT signaling pathway inhibitor 4.
      
 0.472
TNPO2
Transportin 2.
   
 
 0.465
TNPO1
Transportin 1.
   
 
 0.465
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.