STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SERPINH1Serpin family H member 1; Belongs to the serpin family. (419 aa)    
Predicted Functional Partners:
SPARC
Secreted protein acidic and cysteine rich.
   
 
 0.843
OS9
OS9 endoplasmic reticulum lectin.
    
 
 0.815
PPIC
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.806
NUDCD1
NudC domain containing 1.
    
   0.764
FKBP10
Peptidylprolyl isomerase.
   
 
 0.752
FAF2
Fas associated factor family member 2.
    
  0.740
COL4A2
Collagen type IV alpha 2 chain.
   
 0.734
COL5A2
Collagen type V alpha 2 chain.
   
 0.734
COL4A6
Collagen type IV alpha 6 chain.
   
 0.734
P3H4
Prolyl 3-hydroxylase family member 4 (non-enzymatic).
   
 
 0.701
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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