Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
COA4Cytochrome c oxidase assembly factor 4 homolog. (87 aa)    
Predicted Functional Partners:
SDHAF4
Succinate dehydrogenase complex assembly factor 4.
      
 0.737
SSBP1
Single stranded DNA binding protein 1.
   
 
 0.717
CMC2
COX assembly mitochondrial protein.
   
 
 0.669
SMIM20
Uncharacterized protein.
   
  
 0.624
MSH6
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
    
 
 0.585
G3UJP2_LOXAF
Uncharacterized protein.
   
 
 0.576
CMC4
C-X9-C motif containing 4.
    
 0.570
ZDHHC4
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.562
COX19
Cytochrome c oxidase assembly factor COX19.
   
 
 0.521
CHCHD4
Coiled-coil-helix-coiled-coil-helix domain containing 4.
   
 
 0.494
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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