Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APEX1 | CREBBP | ENSLAFP00000017753 | ENSLAFP00000013091 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | CREB binding protein. | 0.426 |
| APEX1 | GADD45A | ENSLAFP00000017753 | ENSLAFP00000007844 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | Growth arrest and DNA damage inducible alpha. | 0.579 |
| APEX1 | MUTYH | ENSLAFP00000017753 | ENSLAFP00000014560 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | 0.763 |
| APEX1 | NTHL1 | ENSLAFP00000017753 | ENSLAFP00000012920 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. | 0.992 |
| APEX1 | OGG1 | ENSLAFP00000017753 | ENSLAFP00000013805 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | 8-oxoguanine DNA glycosylase. | 0.868 |
| APEX1 | SMUG1 | ENSLAFP00000017753 | ENSLAFP00000001827 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | Single-strand-selective monofunctional uracil-DNA glycosylase 1. | 0.624 |
| APEX1 | TDG | ENSLAFP00000017753 | ENSLAFP00000003183 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | Thymine DNA glycosylase. | 0.758 |
| APEX1 | UNG | ENSLAFP00000017753 | ENSLAFP00000011304 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family. | 0.827 |
| CREBBP | APEX1 | ENSLAFP00000013091 | ENSLAFP00000017753 | CREB binding protein. | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | 0.426 |
| CREBBP | G3UN99_LOXAF | ENSLAFP00000013091 | ENSLAFP00000029308 | CREB binding protein. | Small ubiquitin-related modifier. | 0.893 |
| CREBBP | SUMO1 | ENSLAFP00000013091 | ENSLAFP00000017131 | CREB binding protein. | Small ubiquitin-related modifier. | 0.893 |
| CREBBP | TDG | ENSLAFP00000013091 | ENSLAFP00000003183 | CREB binding protein. | Thymine DNA glycosylase. | 0.718 |
| G3UN99_LOXAF | CREBBP | ENSLAFP00000029308 | ENSLAFP00000013091 | Small ubiquitin-related modifier. | CREB binding protein. | 0.893 |
| G3UN99_LOXAF | TDG | ENSLAFP00000029308 | ENSLAFP00000003183 | Small ubiquitin-related modifier. | Thymine DNA glycosylase. | 0.899 |
| GADD45A | APEX1 | ENSLAFP00000007844 | ENSLAFP00000017753 | Growth arrest and DNA damage inducible alpha. | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | 0.579 |
| GADD45A | TDG | ENSLAFP00000007844 | ENSLAFP00000003183 | Growth arrest and DNA damage inducible alpha. | Thymine DNA glycosylase. | 0.725 |
| MUTYH | APEX1 | ENSLAFP00000014560 | ENSLAFP00000017753 | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | 0.763 |
| MUTYH | NTHL1 | ENSLAFP00000014560 | ENSLAFP00000012920 | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. | 0.786 |
| MUTYH | OGG1 | ENSLAFP00000014560 | ENSLAFP00000013805 | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | 8-oxoguanine DNA glycosylase. | 0.865 |
| MUTYH | TDG | ENSLAFP00000014560 | ENSLAFP00000003183 | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | Thymine DNA glycosylase. | 0.731 |
page 1 of 3