STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFYBNuclear transcription factor Y subunit beta. (205 aa)    
Predicted Functional Partners:
NFYA
Nuclear transcription factor Y subunit alpha.
   
 0.999
NFYC
Nuclear transcription factor Y subunit gamma.
   
 0.997
CHRAC1
Chromatin accessibility complex subunit 1.
   
 0.853
SPDYA
Speedy/RINGO cell cycle regulator family member A.
   
 0.853
SPDYC
Speedy/RINGO cell cycle regulator family member C.
   
 0.853
REPIN1
Replication initiator 1.
    
 
 0.702
GATA3
GATA binding protein 3.
    
 
 0.642
GATA2
GATA binding protein 2.
    
 
 0.642
RPS13
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
      
 0.590
HIKESHI
Heat shock protein nuclear import factor hikeshi.
   
  
 0.563
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.