STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM162BFamily with sequence similarity 162 member B. (105 aa)    
Predicted Functional Partners:
USP32
Uncharacterized protein; Belongs to the peptidase C19 family.
    
 
 0.825
TMEM167A
Protein kish; Involved in the early part of the secretory pathway.
      
 0.810
WDR7
WD repeat domain 7.
    
 
 0.810
SCFD1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.742
YPEL5
Protein yippee-like; Belongs to the yippee family.
      
 0.737
ZPLD1
Zona pellucida like domain containing 1.
      
 0.708
TENT5A
Terminal nucleotidyltransferase 5A.
   
  
 0.692
GOLGA5
Golgin A5.
      
 0.657
COPZ1
Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.
    
 
 0.566
GPR153
G protein-coupled receptor 153.
    
 
 0.540
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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