STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAFB2Scaffold attachment factor B2. (930 aa)    
Predicted Functional Partners:
ERH
Enhancer of rudimentary homolog; May have a role in the cell cycle.
   
 
 0.756
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U like 1.
   
 
 0.653
ESR1
NR LBD domain-containing protein.
    
 
 0.589
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 
 0.529
TRA2B
Transformer 2 beta homolog.
   
 0.520
SRSF1
Uncharacterized protein.
   
 0.519
TRA2A
Transformer 2 alpha homolog.
   
 0.518
UBE2I
Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.508
ACIN1
Apoptotic chromatin condensation inducer 1.
   
 
 0.493
HNRNPUL2
Uncharacterized protein.
   
 
 0.489
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.