STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALKBH7AlkB homolog 7. (221 aa)    
Predicted Functional Partners:
ALKBH1
AlkB homolog 1, histone H2A dioxygenase.
      
 0.800
PLAAT1
Phospholipase A and acyltransferase 1.
   
   0.702
ALKBH6
Uncharacterized protein.
   
  
 0.697
ALKBH4
AlkB homolog 4, lysine demethylase.
   
  
 0.643
SAMD10
Sterile alpha motif domain containing 10.
      
 0.628
NDUFB7
NADH:ubiquinone oxidoreductase subunit B7.
   
    0.614
ALKBH8
AlkB homolog 8, tRNA methyltransferase.
      
 0.602
AVPI1
Arginine vasopressin induced 1.
      
 0.601
PMS1
PMS1 homolog 1, mismatch repair system component.
      
 0.597
MRPS34
Mitochondrial ribosomal protein S34.
   
    0.597
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.