STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TEX30Testis expressed 30. (225 aa)    
Predicted Functional Partners:
MCRS1
Microspherule protein 1.
   
 0.865
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.855
TEX29
Testis expressed 29.
      
 0.772
KMT2E
Lysine methyltransferase 2E.
    
 0.696
PHF20
PHD finger protein 20.
    
 0.696
PHF13
PHD finger protein 13.
    
 0.696
HCFC2
Host cell factor C2.
   
 0.589
HCFC1
Host cell factor C1.
   
 0.589
TTC6
Tetratricopeptide repeat domain 6.
    
 0.586
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase.
    
 0.586
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.