Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
G3ST92_LOXAFXPGN domain-containing protein. (770 aa)    
Predicted Functional Partners:
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
   
 0.926
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
   
 0.917
XPA
XPA, DNA damage recognition and repair factor.
    
 0.910
ERCC2
ERCC excision repair 2, TFIIH core complex helicase subunit.
   
 0.886
GTF2H1
General transcription factor IIH subunit 1.
    
 0.851
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
   
 0.826
WRN
WRN RecQ like helicase.
  
 0.813
GTF2H2
General transcription factor IIH subunit.
    
 0.796
GTF2H5
General transcription factor IIH subunit 5.
    
 0.792
XPC
XPC complex subunit, DNA damage recognition and repair factor.
   
 0.790
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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