STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCGF3Polycomb group ring finger 3. (242 aa)    
Predicted Functional Partners:
RING1
Ring finger protein 1.
   
 0.959
PCGF1
Polycomb group ring finger 1.
    
0.943
RNF2
RING-type domain-containing protein.
   
0.935
G3UB93_LOXAF
RAWUL domain-containing protein.
   
 0.935
DCAF7
DDB1 and CUL4 associated factor 7.
    
 0.933
RYBP
RING1 and YY1 binding protein.
    
 0.911
PCGF5
Polycomb group ring finger 5.
    
0.908
FBRS
Uncharacterized protein.
    
 0.907
PCGF6
Polycomb group ring finger 6.
    
0.903
CSNK2B
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
    
 0.896
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.