STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NLRC5Uncharacterized protein. (1105 aa)    
Predicted Functional Partners:
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.954
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.951
USP14
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
    
 0.836
NLRX1
NLR family member X1.
      
 0.823
TAP1
Transporter 1, ATP binding cassette subfamily B member.
   
  
 0.743
MAVS
Mitochondrial antiviral signaling protein.
    
 0.727
SH3YL1
SH3 and SYLF domain containing 1.
      
 0.691
FKBP8
Peptidylprolyl isomerase.
   
  
 0.691
AK9
Uncharacterized protein.
   
 
 0.682
G3TCK5_LOXAF
Uncharacterized protein.
   
 
 0.682
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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