STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPR180G protein-coupled receptor 180. (440 aa)    
Predicted Functional Partners:
TMEM161A
Transmembrane protein 161A.
      
 0.731
TGDS
TDP-glucose 4,6-dehydratase.
   
  
 0.699
TMEM181
Transmembrane protein 181.
      
 0.651
GPR176
G protein-coupled receptor 176.
      
 0.600
SGCA
Sarcoglycan alpha.
    
   0.563
USP9X
Ubiquitin specific peptidase 9 X-linked; Belongs to the peptidase C19 family.
      
 0.546
GPR146
G protein-coupled receptor 146.
      
 0.489
GPR107
G protein-coupled receptor 107.
      
 0.486
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
      
 0.472
PMEPA1
Prostate transmembrane protein, androgen induced 1.
      
 0.464
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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