STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC117Coiled-coil domain containing 117. (281 aa)    
Predicted Functional Partners:
VEPH1
Ventricular zone expressed PH domain containing 1.
      
 0.586
MEGF11
Multiple EGF like domains 11.
      
 0.581
CHEK2
Checkpoint kinase 2.
      
 0.565
STIP1
Stress induced phosphoprotein 1.
    
   0.539
GYPC
Uncharacterized protein.
      
 0.520
MSANTD4
Myb/SANT DNA binding domain containing 4 with coiled-coils.
      
 0.514
AP4E1
Adaptor related protein complex 4 subunit epsilon 1.
      
 0.441
GGPS1
Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family.
      
 0.441
ARID4B
AT-rich interaction domain 4B.
      
 0.440
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.