Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC117Coiled-coil domain containing 117. (281 aa)    
Predicted Functional Partners:
STIP1
Stress induced phosphoprotein 1.
    
   0.927
HSPBP1
HSPA (Hsp70) binding protein 1.
    
   0.795
SLC35B2
Solute carrier family 35 member B2.
    
   0.742
VEPH1
Ventricular zone expressed PH domain containing 1.
      
 0.719
CHEK2
Checkpoint kinase 2.
      
 0.627
MEGF11
Multiple EGF like domains 11.
      
 0.625
GYPC
Uncharacterized protein.
      
 0.591
HSP90AB1
Heat shock protein 90 alpha family class B member 1.
    
   0.589
HSP90AA1
HATPase_c domain-containing protein.
    
   0.589
G3ULS6_LOXAF
Uncharacterized protein.
    
   0.589
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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