STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF11ATNF receptor superfamily member 11a. (487 aa)    
Predicted Functional Partners:
TNFSF11
Tumor necrosis factor ligand 6B; Belongs to the tumor necrosis factor family.
    
 0.997
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.992
TRAF1
TNF receptor-associated factor.
    
 0.935
TRAF2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.935
TRAF5
TNF receptor-associated factor.
    
 0.895
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.879
RELCH
RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing.
 
    
 0.727
NDUFAF3
NADH:ubiquinone oxidoreductase complex assembly factor 3.
      
 0.639
TNFRSF12A
TNF receptor superfamily member 12A.
     
 0.607
TNFSF13B
TNF superfamily member 13b; Belongs to the tumor necrosis factor family.
     
 0.577
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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