STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM92AFamily with sequence similarity 92 member A. (305 aa)    
Predicted Functional Partners:
TM2D1
TM2 domain containing 1.
      
 0.752
CHCHD7
Coiled-coil-helix-coiled-coil-helix domain containing 7.
      
 0.728
IMPAD1
Inositol monophosphatase domain containing 1.
      
 0.701
C2CD2
C2 calcium dependent domain containing 2.
      
 0.695
TRDMT1
tRNA aspartic acid methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
      
 0.676
RANBP2
RAN binding protein 2.
   
 0.587
CAGE1
Cancer antigen 1.
      
 0.572
TMEM179
Transmembrane protein 179.
      
 0.569
WDR27
Uncharacterized protein.
   
 0.567
HECTD2
HECT domain E3 ubiquitin protein ligase 2.
   
 0.562
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.