STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAP1GDS1Rap1 GTPase-GDP dissociation stimulator 1. (628 aa)    
Predicted Functional Partners:
RHOB
Ras homolog family member B.
    
 0.618
RHOA
Ras homolog family member A.
    
 0.618
RHOC
Uncharacterized protein.
    
 0.618
RHOT1
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
    
 0.578
RHOT2
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
    
 0.578
FBXL4
F-box and leucine rich repeat protein 4.
      
 0.577
DENND4A
DENN domain containing 4A.
      
 0.577
STPG2
Sperm tail PG-rich repeat containing 2.
      
 0.519
TTC23
Tetratricopeptide repeat domain 23.
      
 0.519
ARAP2
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2.
      
 0.515
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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