Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMED2Transmembrane p24 trafficking protein 2. (201 aa)    
Predicted Functional Partners:
TMED10
Transmembrane p24 trafficking protein 10.
   
 0.999
TMED3
Transmembrane p24 trafficking protein 3.
   
 0.975
TMED5
Transmembrane p24 trafficking protein 5.
   
 
 0.942
TMED4
Transmembrane p24 trafficking protein 4.
   
 0.922
TMED9
Transmembrane p24 trafficking protein 9.
   
 0.922
G3TM14_LOXAF
GOLD domain-containing protein.
   
 0.911
GORASP2
Golgi reassembly stacking protein 2.
   
 0.891
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 0.883
LMAN2
Lectin, mannose binding 2.
   
 0.874
TMED7
GOLD domain-containing protein.
   
 0.863
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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